UNB logo_Tommi Linnnansaari
Tommi Linnansaari, Ph.D.
 Research Associate
M.Sc. (University of Helsinki), Ph.D. (University of New Brunswick)
Canadian Rivers Institute

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MAES

Current projects:

 Mactaquac Aquatic Ecosystem Study (MAES)


 I am a c
o-lead of a large multidisciplinary aquatic ecosystem study examining the future of
 a large hydropower dam. Mactaquac Dam (MD), a 672 MW run-of-the-river hydroelectric facility was
 constructed in 1968 on the main stem of the Saint John River (SJR), New Brunswick, Canada. The facility
 is expected to reach the end of its service life by 2030, when the powerhouse and spillway will no longer
 be viable because of an alkali-aggregate reaction with the concrete.
 
 NB Power will settle on a preferred option for the future of Mactaquac Dam by 2016. Options identified
 for the future include 1) repowering the station with a new powerhouse and spillway, 2) rebuilding the spillway
 only or 3) removing all parts of the station and restoring the river. The decision will be based on a combination
 of economic, environmental, and social consequences.

 The Mactaquac Aquatic Ecosystem Study (MAES) is a planned, whole-river ecosystem study and
 manipulation. It begins with a multi-year assessment of the structure and function of a large river ecosystem,
 followed by a manipulation of flow, sediment load, and thermal regime with consequential effects on the
 ecosystem, and then a multi-year period to monitor the recovery to a new river state.

 MAES takes a phased approach to address the scientific challenges for the future of the dam.
 Phase I (2014-17) is the assessment of the key baseline environmental conditions and description of the
 environmental challenges and opportunities for either replacing or removing the dam.

 The planned studies are described in entirety on the MAES website. Overall, we are currently working on
 over 30 separate projects, and I am (or will be) supervising a number of students in the MAES project. I am also working
 on a large review on understanding the ecological lessons learned from large dam removals and another concentrating on
 the state of the art of fish passage in multi-species complex.
 
 A short CBC radio interview talking about our Mactaquac Project is available here.
 


 MAES: Reservoir transit and downstream approaches to a large dam by Atlantic salmon
 
 (Supervising Ph.D. candidate Amanda Babin)

 The project is examining the migration success of Atlantic salmon smolts, adults, and post-spawners (kelts) in
 the 96 km long Mactaquac reservoir. Based on various acoustic telemetry studies, Amanda will establish
 the migration success of the different life stages of Atlantic salmon, and identify any potential bottleneck issues and/or
 areas for migration in the reservoir. She will also examine the dam approach of Atlantic salmon in detail (3D) to be able
 to give recommendations for downstream passage in an event a new powerhouse will be constructed. Amanda will
 also link the migration paths to various hydrodynamic and temperature models that are being deviced by other MAES
 members to be able to determine what dictates migration patterns in large reservoir environments.

 CBC news broadcast regarding the Atlantic salmon project is available here ... fast forward to 23:45 mark of the news.







 MAES: Restoration potential for reproduction by striped bass (Morone saxatilis) in the Saint
 John River (SJR)

 (Supervising Ph.D. candidate Sam Andrews)

 Striped bass formed an important commercial and aboriginal fishery in the SJR until 1978 when the fishery was closed as a
 result of depleted stock and declined catches. Due to the absence of successful recruitment since 1979, the status of striped
 bass in SJR has been considered extirpated. The reasons for the decline has been attributed to altered flow regime downstream
 of the Mactaquac Dam (MD) due to operations that could have modified the suitability of the
spawning grounds that were known to
 have existed in the immediate downstream vicinity of the MD
and parallel changes in water quality. Despite the apparent
 disappearance of the SJR striped bass population, the river is frequented by migrant striped bass from other river systems located
 in the Bay of Fundy and the Eastern Atlantic seaboard, and the presence of these fish may allow for recovery of the striped bass in
 the SJR given the alternative future options for MD. To better understand the potential for and the actual efficient means for recovery
 of the striped bass in the SJR the ecology and
specific flow requirements must be understood.






 MAES: Reproductive ecology of Atlantic (Acipenser oxyrinchus) and shortnose sturgeon (A. brevirostrum)
 in the Saint John River (SJR)


(Seeking a Ph.D. or M.Sc candidate to carry out this research)

 Shortnose sturgeon only exists in the SJR in Canada, and spawning of Atlantic sturgeon in the Bay of Fundy is also believed to only occur
 in the SJR. Based on recent larval collections, the spawning of shortnose sturgeon is known to occur somewhere between the Mactaquac
 Dam and the area known locally as Hartt Island located an approx. 10km downstream from the dam. However, the specific location, or the
 habitat and flow characteristics ensuring successful spawning, are currently unknown.

 For Atlantic sturgeon, spawning is also believed to occur somewhere downstream of the MD, but no information exists where, or when,
 the spawning may take place.

 Survival during the early period of life is strongly linked to flow regime in systems operated for hydropower in other sturgeon species as flow
 regime controls both the quantity of suitable spawning habitat and the success of egg and larval survival. Therefore, mechanisms controlling
 spawning success of the sturgeon species’ in the SJR need to be explicitly known for any potential future scenario for MD to ensure that the
 existence of these species in Canada will not be compromised.

 The project will use acoustic telemetry to track shortnose and Atlantic sturgeon to determine the location of spawning grounds of both species
 and to extend the understanding of seasonal habitats of adults in the SJR.  When the location of spawning grounds has been established,
 telemetry effort will focus on studying the fine-scale, 3D effects of flow and velocity fields on spawning and recruitment success. Output from
 hydrodynamic models developed by other project partners will be combined with field data and re-analysed using River2D to build a model
 of potential spawning habitats as a function of discharge. Future spawning sites for flow regimes predicted for either the dam renewal or removal
 scenarios can then be predicted.


 MAES: Status of fish passage in the hydropower regulated Saint John River: What do we know?

 (Supervising Senior Research Project of Shane Fowler)

 Shane's project will pull together the existing knowledge describing the current fish passage and migration issues
in three major hydropower dams
 (Mactaquac, Beechwood, Tobique-Narrows) in the Saint John River based on historical studies carried out by various NGOs, and provincial or
 federal agencies.
Project will also thoroughly catalogue and describe the dam structures and any devices designed and installed (or planned) for fish
 passage in the three dams. 
He will also analyse patterns in the abundance of selected  migratory fish species pre- and post damming period based on
 historical electrofishing data and fish counts at dam facilities.

 


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 Biological significance of thermal refugia for juvenile Atlantic salmon
 
(Supervising Ph.D. candidate Emily Corey)        
 

 This project is a part of a large interdisciplinary reasearch group stydying critical thermal refugia for
 Atlantic salmon and brook trout populations of eastern Canadian rivers. Under the current climate
 change scenarios, the summer water temperature regime in many eastern Canadian rivers is
 predicted to become less favorable for coolwater fishes; it is believed that stress thresholds will
 be exceeded more often and in more reaches in future.

 The main focus of Emily's PhD project is to examine how the incidence of temperature stress events
 and proximity to thermal refugia affect the distribution and abundance of juvenile Atlantic salmon.
 
 We also study whether the fish behaviour and distribution changes after successive high temperature
 events, and if the possible movement response is adaptive in reducing stress and mortality. We have
 used PIT-telemetry at a large spatial scale to document the movement patterns of hundreds of juvenile
 salmon and the data will allow us to accurately model the thresholds determining the movement response
 towards the cold water refugia during thermally stressing periods. PIT-telemetry surveys were carried out
 in the Little Southwest  Miramichi River in New Brunswick in 2009 & 2010, and in the Riviere Ouelle in
 Quebec in 2011 and 2012.

 Project further examined salmon parr densities on a large spatial scale before and after thermally
 stressing events in 2011 an 2012 to fully understand the significance of different types of thermal
 refugia for the Atlantic salmon populations.

 Studies in 2013 consisted of working in collaboration with Dr. S. Currie in a laboratory setting
 in Mt. Allison University, where Emily set up an experiment to better understand how juvenile Atlantic
 salmon physiologically recover after thermally stressing events. Such data is mandatory so that
 we can understand the mechanisms underlying the aggregation behaviour during heat stress.

 In 2014 we will be in an intense publishing phase of this research.     

 
 Participating institutions: Institut National de Recherche Scientifique (Prof. Bergeron, Prof. St-Hilaire),
 McGill Univerity (Prof. M. Lapointe, Principal Investgator; Prof. J. McKenzie), Université de
 Montréal (Prof. D. Boisclair) and Canadian Rivers Institute at University of New Brunswick
 (Prof. A.Curry,  Prof. R. Cunjak, Prof. K. MacQuarrie) and a number of graduate students and
 two postdoctoral fellows at the above institutions.

 The project is funded by NSERC and OURANOS-HYDRO QUEBEC
 


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 The importance of hyporheos and groundwater habitats for Atlantic salmon, brown
 trout and Arctic char in streams


 This project is originally stemming from the realization that the prevalence of a salmon parasite,
 Gyrodactulus salaris, may be linked to the ability of juvenile stream salmonids to escape the
 chemical treatments (like rotenon) by utilizing the in-substrate habitat in areas rich with groundwater.
 While in situ work examining this hypothesis has not yet been carried out, the first phase of this
 study focused on collating a state-of-the-art report on the subject (by the Norwegian participants),
 which is currently being modified to a peer-reviewed publication.

 Participating institutions: Freshwater Ecology and Inland Fisheries Laboratory, University of Oslo
 (Dr. J. Heggenes, Dr. Å. Brabrand), Norwegian Institute of Nature Research (Dr. G. Bremset),
 Canadian Rivers Institute (Dr. T. Linnansaari, Dr. R. Cunjak)

 The project was funded by the Norwegian Directorate for Nature Management (DN),
 administrated by Atle Hindar at Norwegian Institute for Water Research (NIVA).

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Mactaquac Generating Station

Mactaquac Generating Station, consisting of an earthen dam, diversion sluiceway, main spillway and power house.
Photo credit: Energie NB Power




installing receivers in Saint John River

Ph.D. candidate Amanda Babin and senior technician Mark Gautreau installing acoustic receivers in the Saint John River for Atlantic salmon telemetry study.



tagging striped bass
Senior technician Mark Gautreau tagging a striped bass for an acoustic telemetry study at the Mactaquac Generating Station.





Shortnose
A shortnose sturgeon captured in the presumed spawning grounds in the Saint John River.


Beechwood Generating Station
Beechwood Generating Station






 Parr aggregation in LSWMiramichi
An aggregation of Atlantic salmon parr in a cold water refugia in the Little Southwest Miramichi River, New Brunswick, Canada, during an extreme heat stress event in July 2010.
 Photo credit: R.Cunjak.


Tracking for salmon parr
 E. Corey and P. Gallego tracking PIT-tagged juvenile Atlantic salmon in the Little Southwest Miramichi River in July 2010.
 Photo credit: M. Fitzgerald










 

 
   









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Last update 28 May 2014 by Tommi Linnansaari